Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | EJI01_20455 | Not Available | Positive | 4223316 - 4223939 | 22610.3 |
| hypothetical protein | EJI01_20460 | Not Available | Positive | 4224049 - 4224537 | 17143.6 |
| merr family dna-binding transcriptional regulator | EJI01_20465 | Not Available | Positive | 4224594 - 4225007 | 15569.1 |
| paai family thioesterase | EJI01_20470 | Not Available | Positive | 4225004 - 4225450 | 15384.8 |
| metallophosphoesterase | EJI01_20475 | Not Available | Negative | 4225419 - 4226603 | 42607.0 |
| hypothetical protein | EJI01_20480 | Not Available | Negative | 4226697 - 4226945 | 8843.1 |
| carboxypeptidase regulatory-like domain-containing protein | EJI01_20485 | Not Available | Negative | 4227005 - 4227469 | 16254.3 |
| hypothetical protein | EJI01_20490 | Not Available | Negative | 4227578 - 4228075 | 17837.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | EJI01_20495 | Not Available | Negative | 4228239 - 4230857 | 95424.0 |
| dna polymerase iii subunit beta | EJI01_20500 | Not Available | Negative | 4230969 - 4232075 | 40345.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
