Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eve domain-containing protein | EJI01_20340 | Not Available | Positive | 4201146 - 4201610 | 17260.9 |
| hypothetical protein | EJI01_20345 | Not Available | Positive | 4201648 - 4201848 | 6989.64 |
| cupin-like domain-containing protein | EJI01_20350 | Not Available | Positive | 4201915 - 4203018 | 41038.0 |
| methyltransferase, tigr04325 family | EJI01_20370 | Not Available | Positive | 4204568 - 4204667 | 3656.22 |
| gtpase | EJI01_20375 | Not Available | Negative | 4204664 - 4205605 | 33134.2 |
| two-component system response regulator creb | EJI01_20380 | Not Available | Positive | 4205682 - 4206428 | 27439.1 |
| two-component system sensor histidine kinase crec | EJI01_20385 | Not Available | Positive | 4206455 - 4207891 | 52793.6 |
| pbp1a family penicillin-binding protein | EJI01_20390 | Not Available | Negative | 4207896 - 4210238 | 84854.5 |
| cell envelope integrity protein cred | EJI01_20395 | Not Available | Negative | 4210235 - 4211641 | 50239.4 |
| vwa domain-containing protein | EJI01_20400 | Not Available | Positive | 4211836 - 4213908 | 75396.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
