Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | EJI01_20290 | Not Available | Negative | 4190858 - 4191625 | 25960.3 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | EJI01_20295 | Not Available | Negative | 4191723 - 4193330 | 57840.5 |
| purine-nucleoside phosphorylase | EJI01_20300 | Not Available | Negative | 4193334 - 4194134 | 27801.7 |
| cytidine deaminase | EJI01_20305 | Not Available | Negative | 4194137 - 4194535 | 13906.6 |
| abc transporter permease | EJI01_20310 | Not Available | Negative | 4194556 - 4195524 | 33406.0 |
| abc transporter permease | EJI01_20315 | Not Available | Negative | 4195517 - 4196650 | 39132.8 |
| abc transporter atp-binding protein | EJI01_20320 | Not Available | Negative | 4196733 - 4198253 | 54704.6 |
| bmp family abc transporter substrate-binding protein | EJI01_20325 | Not Available | Negative | 4198290 - 4199261 | 34035.2 |
| adenosine deaminase family protein | EJI01_20330 | Not Available | Positive | 4199384 - 4200442 | 36691.2 |
| lyse family translocator | EJI01_20335 | Not Available | Positive | 4200500 - 4201138 | 21945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
