Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export protein flij | EJI01_20240 | Not Available | Positive | 4183125 - 4183580 | 17473.6 |
| flagellar hook-length control protein flik | EJI01_20245 | Not Available | Positive | 4183602 - 4184924 | 43272.2 |
| flagellar basal body-associated protein flil | EJI01_20250 | Not Available | Positive | 4185287 - 4185769 | 17338.1 |
| flagellar motor switch protein flim | EJI01_20255 | Not Available | Positive | 4185782 - 4186783 | 37393.1 |
| flagellar motor switch protein flin | EJI01_20260 | Not Available | Positive | 4186776 - 4187219 | 15405.3 |
| flagellar biosynthetic protein flio | EJI01_20265 | Not Available | Positive | 4187216 - 4187698 | 16428.3 |
| flagellar biosynthetic protein flip | EJI01_20270 | Not Available | Positive | 4187698 - 4188462 | 27769.1 |
| flagellar biosynthetic protein fliq | EJI01_20275 | Not Available | Positive | 4188459 - 4188728 | 9404.03 |
| flagellar biosynthetic protein flir | EJI01_20280 | Not Available | Positive | 4188732 - 4189526 | 27497.1 |
| thymidine phosphorylase | EJI01_20285 | Not Available | Negative | 4189536 - 4190855 | 45143.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
