Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EJI01_20080 | Not Available | Negative | 4150690 - 4151487 | 29648.6 |
| duf3182 family protein | EJI01_20085 | Not Available | Negative | 4151484 - 4152617 | 40352.6 |
| hypothetical protein | EJI01_20090 | Not Available | Positive | 4152808 - 4152987 | 6569.39 |
| rna polymerase sigma factor flia | EJI01_20095 | Not Available | Negative | 4153011 - 4153745 | 27448.8 |
| flagellar biosynthesis protein flhf | EJI01_20105 | Not Available | Negative | 4154616 - 4157030 | 86304.0 |
| flagellar biosynthesis protein flha | EJI01_20110 | Not Available | Negative | 4157027 - 4159123 | 74503.4 |
| flagellar type iii secretion system protein flhb | EJI01_20115 | Not Available | Negative | 4159120 - 4160262 | 41781.3 |
| protein phosphatase chez | EJI01_20120 | Not Available | Negative | 4160374 - 4161024 | 24231.8 |
| chemotaxis protein chey | EJI01_20130 | Not Available | Negative | 4161238 - 4161639 | 14635.0 |
| chemotaxis response regulator protein-glutamate methylesterase | EJI01_20135 | Not Available | Negative | 4161667 - 4162752 | 39071.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
