Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | EJI01_01935 | Not Available | Negative | 412081 - 412734 | 23022.5 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | EJI01_01940 | Not Available | Negative | 412734 - 413354 | 22119.6 |
| oxygen-dependent coproporphyrinogen oxidase | EJI01_01945 | Not Available | Negative | 413345 - 414262 | 34535.1 |
| phosphoribosylamine--glycine ligase | EJI01_01950 | Not Available | Negative | 414259 - 415569 | 46755.1 |
| yebc/pmpr family dna-binding transcriptional regulator | EJI01_01955 | Not Available | Negative | 415595 - 416320 | 25949.6 |
| nad(p)/fad-dependent oxidoreductase | EJI01_01960 | Not Available | Positive | 416493 - 417851 | 50816.6 |
| hypothetical protein | EJI01_01965 | Not Available | Positive | 417872 - 418879 | 35872.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EJI01_01970 | Not Available | Positive | 418895 - 419692 | 29687.9 |
| glycosyltransferase family 2 protein | EJI01_01975 | Not Available | Positive | 419659 - 420435 | 28686.8 |
| hypothetical protein | EJI01_01995 | Not Available | Positive | 427146 - 428156 | 34340.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
