Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(i)-responsive transcriptional regulator | EJI01_19825 | Not Available | Positive | 4107770 - 4108234 | 17504.9 |
| copper-translocating p-type atpase | EJI01_19830 | Not Available | Positive | 4108309 - 4110582 | 78885.1 |
| duf411 domain-containing protein | EJI01_19835 | Not Available | Positive | 4110623 - 4111093 | 16686.2 |
| copper-binding protein | EJI01_19840 | Not Available | Positive | 4111159 - 4111437 | 9917.13 |
| hypothetical protein | EJI01_19845 | Not Available | Positive | 4111516 - 4111926 | 14319.0 |
| hypothetical protein | EJI01_19850 | Not Available | Positive | 4112092 - 4112397 | 10309.0 |
| tolc family protein | EJI01_19855 | Not Available | Positive | 4112394 - 4113809 | 50782.0 |
| copper oxidase | EJI01_19860 | Not Available | Positive | 4113834 - 4115249 | 52109.8 |
| hypothetical protein | EJI01_19865 | Not Available | Positive | 4115268 - 4115756 | 17374.9 |
| copper-binding protein | EJI01_19870 | Not Available | Positive | 4115790 - 4116083 | 10507.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
