Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1345 domain-containing protein | EJI01_19775 | Not Available | Negative | 4093874 - 4094527 | 23842.5 |
| c-type cytochrome | EJI01_19780 | Not Available | Positive | 4094627 - 4095343 | 25486.8 |
| cytochrome c | EJI01_19785 | Not Available | Positive | 4095349 - 4096611 | 45139.9 |
| cupin | EJI01_19790 | Not Available | Negative | 4096622 - 4097590 | 36214.1 |
| copper-translocating p-type atpase | EJI01_19795 | Not Available | Positive | 4097779 - 4100007 | 77389.2 |
| cu(i)-responsive transcriptional regulator | EJI01_19800 | Not Available | Positive | 4100037 - 4100435 | 15177.3 |
| hypothetical protein | EJI01_19805 | Not Available | Positive | 4100609 - 4101052 | 15328.6 |
| tolc family protein | EJI01_19810 | Not Available | Positive | 4101193 - 4102518 | 48755.8 |
| efflux rnd transporter periplasmic adaptor subunit | EJI01_19815 | Not Available | Positive | 4102521 - 4104173 | 58112.2 |
| efflux rnd transporter permease subunit | EJI01_19820 | Not Available | Positive | 4104170 - 4107340 | 115766.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
