Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase family protein | EJI01_19725 | Not Available | Positive | 4083605 - 4084414 | 30027.4 |
| fumarylacetoacetase | EJI01_19730 | Not Available | Positive | 4084420 - 4085739 | 46984.6 |
| phosphatase pap2 family protein | EJI01_19735 | Not Available | Positive | 4085819 - 4086523 | 26004.3 |
| acyl carrier protein | EJI01_19740 | Not Available | Positive | 4086556 - 4086798 | 8724.35 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | EJI01_19745 | Not Available | Positive | 4086795 - 4088000 | 41256.4 |
| 3-deoxy-d-manno-octulosonic acid transferase | EJI01_19750 | Not Available | Negative | 4088017 - 4089372 | 48382.9 |
| phosphomannomutase/phosphoglucomutase | EJI01_19755 | Not Available | Negative | 4089388 - 4090770 | 48480.2 |
| dna-3-methyladenine glycosylase 2 family protein | EJI01_19760 | Not Available | Positive | 4090887 - 4092431 | 54733.8 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EJI01_19765 | Not Available | Positive | 4092428 - 4092925 | 17412.7 |
| eama/rhat family transporter | EJI01_19770 | Not Available | Positive | 4093018 - 4093902 | 31028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
