Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_19670 | Not Available | Positive | 4073442 - 4074029 | 21235.5 |
| phage holin family protein | EJI01_19675 | Not Available | Positive | 4074113 - 4074514 | 14173.0 |
| transcriptional regulator | EJI01_19680 | Not Available | Negative | 4074529 - 4074804 | 9840.11 |
| hypothetical protein | EJI01_19685 | Not Available | Positive | 4074879 - 4076210 | 47157.9 |
| mfs transporter | EJI01_19690 | Not Available | Negative | 4076248 - 4077459 | 40763.9 |
| acetoacetate--coa ligase | EJI01_19695 | Not Available | Negative | 4077541 - 4079550 | 73574.8 |
| metal abc transporter substrate-binding protein | EJI01_19705 | Not Available | Positive | 4080340 - 4081284 | 33480.5 |
| abc transporter atp-binding protein | EJI01_19710 | Not Available | Positive | 4081281 - 4082057 | 28292.3 |
| abc transporter permease subunit | EJI01_19715 | Not Available | Positive | 4082050 - 4082817 | 27255.4 |
| abc transporter permease | EJI01_19720 | Not Available | Positive | 4082814 - 4083587 | 27200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
