Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | EJI01_19620 | Not Available | Negative | 4065424 - 4066620 | 43138.9 |
| lysr family transcriptional regulator | EJI01_19625 | Not Available | Positive | 4066792 - 4067712 | 33548.7 |
| zinc ribbon domain-containing protein | EJI01_19630 | Not Available | Positive | 4067776 - 4067940 | 6170.3 |
| peroxiredoxin | EJI01_19635 | Not Available | Positive | 4068034 - 4068693 | 24527.4 |
| mbl fold metallo-hydrolase | EJI01_19640 | Not Available | Positive | 4068708 - 4069748 | 38044.9 |
| phytanoyl-coa dioxygenase family protein | EJI01_19645 | Not Available | Positive | 4069755 - 4070567 | 29985.7 |
| sel1 repeat family protein | EJI01_19650 | Not Available | Negative | 4070571 - 4070978 | 14811.0 |
| lysr family transcriptional regulator | EJI01_19655 | Not Available | Positive | 4071100 - 4071987 | 32417.7 |
| hypothetical protein | EJI01_19660 | Not Available | Positive | 4071984 - 4072289 | 10920.4 |
| hypothetical protein | EJI01_19665 | Not Available | Negative | 4072296 - 4073105 | 29747.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
