Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | EJI01_19570 | Not Available | Positive | 4055351 - 4056217 | 31562.5 |
| sdr family oxidoreductase | EJI01_19575 | Not Available | Positive | 4056239 - 4057003 | 25935.2 |
| 3-keto-5-aminohexanoate cleavage protein | EJI01_19580 | Not Available | Positive | 4057000 - 4057878 | 31592.5 |
| zinc-binding alcohol dehydrogenase family protein | EJI01_19585 | Not Available | Positive | 4057882 - 4058883 | 34871.7 |
| cupin domain-containing protein | EJI01_19590 | Not Available | Positive | 4058893 - 4059252 | 13047.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_19595 | Not Available | Positive | 4059297 - 4060277 | 34011.4 |
| amidohydrolase | EJI01_19600 | Not Available | Positive | 4060283 - 4062280 | 71804.7 |
| hypothetical protein | EJI01_19605 | Not Available | Positive | 4062309 - 4062767 | 16256.9 |
| fic family protein | EJI01_19610 | Not Available | Negative | 4062776 - 4063912 | 41778.8 |
| coa transferase | EJI01_19615 | Not Available | Negative | 4064048 - 4065292 | 44124.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
