Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1127 domain-containing protein | EJI01_19515 | Not Available | Positive | 4042065 - 4042274 | 7642.38 |
| 5-oxoprolinase | EJI01_19520 | Not Available | Negative | 4042271 - 4045912 | 129176.0 |
| trap transporter large permease subunit | EJI01_19525 | Not Available | Negative | 4045955 - 4047253 | 46183.2 |
| trap transporter small permease | EJI01_19530 | Not Available | Negative | 4047281 - 4047814 | 19127.8 |
| c4-dicarboxylate abc transporter substrate-binding protein | EJI01_19535 | Not Available | Negative | 4047926 - 4048891 | 34470.1 |
| putative hydro-lyase | EJI01_19540 | Not Available | Negative | 4048920 - 4049747 | 29401.4 |
| lysr family transcriptional regulator | EJI01_19545 | Not Available | Negative | 4049843 - 4050748 | 33415.7 |
| arac family transcriptional regulator | EJI01_19550 | Not Available | Positive | 4050850 - 4051299 | 16710.1 |
| excinuclease abc subunit uvra | EJI01_19560 | Not Available | Positive | 4051755 - 4054148 | 85107.2 |
| laci family transcriptional regulator | EJI01_19565 | Not Available | Negative | 4054186 - 4055214 | 37133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
