Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase | EJI01_01885 | Not Available | Negative | 403170 - 403385 | 7007.23 |
| Trna-lys | Not Available | Not Available | Positive | 403976 - 404051 | Not Available |
| trna threonylcarbamoyladenosine dehydratase | EJI01_01895 | Not Available | Negative | 404098 - 404910 | 28459.9 |
| tol-pal system protein ybgf | EJI01_01900 | Not Available | Negative | 404926 - 405675 | 28126.3 |
| peptidoglycan-associated lipoprotein pal | EJI01_01905 | Not Available | Negative | 405682 - 406197 | 18205.5 |
| tol-pal system protein tolb | EJI01_01910 | Not Available | Negative | 406217 - 407467 | 44442.1 |
| lipid a export permease/atp-binding protein msba | EJI01_01915 | Not Available | Positive | 407690 - 409474 | 64488.2 |
| ribonuclease g | EJI01_01920 | Not Available | Negative | 409484 - 411010 | 56291.9 |
| septum formation inhibitor maf | EJI01_01925 | Not Available | Negative | 411015 - 411620 | 21562.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EJI01_01930 | Not Available | Negative | 411617 - 412084 | 17280.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
