Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate deformylase | EJI01_19315 | Not Available | Negative | 3996317 - 3997135 | 29957.6 |
| formimidoylglutamate deiminase | EJI01_19320 | Not Available | Negative | 3997132 - 3998517 | 49170.3 |
| imidazolonepropionase | EJI01_19325 | Not Available | Negative | 3998514 - 3999755 | 43481.5 |
| hutd family protein | EJI01_19330 | Not Available | Negative | 3999752 - 4000363 | 22094.2 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_19335 | Not Available | Negative | 4000374 - 4001342 | 33408.4 |
| phosphate abc transporter substrate-binding protein | EJI01_19340 | Not Available | Negative | 4001342 - 4002148 | 28934.9 |
| ornithine cyclodeaminase family protein | EJI01_19345 | Not Available | Negative | 4002154 - 4003155 | 36775.6 |
| urocanate hydratase | EJI01_19350 | Not Available | Negative | 4003160 - 4004887 | 62351.3 |
| histidine ammonia-lyase | EJI01_19355 | Not Available | Negative | 4004923 - 4006473 | 53134.2 |
| histidine utilization repressor | EJI01_19360 | Not Available | Negative | 4006531 - 4007283 | 28089.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
