Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamidase | EJI01_19265 | Not Available | Positive | 3984319 - 3985518 | 41526.4 |
| murein l,d-transpeptidase | EJI01_19270 | Not Available | Negative | 3985544 - 3986578 | 36262.6 |
| gtra family protein | EJI01_19275 | Not Available | Negative | 3986811 - 3987209 | 14292.6 |
| glycosyltransferase | EJI01_19280 | Not Available | Negative | 3987206 - 3988192 | 35743.5 |
| hypothetical protein | EJI01_19285 | Not Available | Negative | 3988176 - 3989963 | 65484.5 |
| methionine synthase | EJI01_19290 | Not Available | Negative | 3989963 - 3992677 | 100306.0 |
| pace efflux transporter | EJI01_19295 | Not Available | Negative | 3992828 - 3993265 | 15850.6 |
| lysr family transcriptional regulator | EJI01_19300 | Not Available | Positive | 3993363 - 3994250 | 31662.2 |
| ligand-binding protein sh3 | EJI01_19305 | Not Available | Negative | 3994261 - 3995109 | 31304.9 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | EJI01_19310 | Not Available | Negative | 3995226 - 3996272 | 37594.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
