Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EJI01_19110 | Not Available | Negative | 3953859 - 3954743 | 32943.8 |
| long-chain fatty acid--coa ligase | EJI01_19115 | Not Available | Positive | 3954846 - 3956537 | 61566.6 |
| mbl fold metallo-hydrolase | EJI01_19120 | Not Available | Positive | 3956534 - 3957457 | 33480.6 |
| hypothetical protein | EJI01_19125 | Not Available | Positive | 3957550 - 3957939 | 14842.6 |
| merr family transcriptional regulator | EJI01_19135 | Not Available | Positive | 3958439 - 3958981 | 20321.5 |
| hypothetical protein | EJI01_19140 | Not Available | Positive | 3959136 - 3959576 | 16512.6 |
| hypothetical protein | EJI01_19145 | Not Available | Positive | 3959576 - 3960886 | 48724.1 |
| dctp deaminase | EJI01_19150 | Not Available | Positive | 3960883 - 3961521 | 22980.8 |
| xre family transcriptional regulator | EJI01_19155 | Not Available | Positive | 3961570 - 3961887 | 11971.4 |
| imma/irre family metallo-endopeptidase | EJI01_19160 | Not Available | Positive | 3961903 - 3962607 | 26030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
