Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EJI01_19005 | Not Available | Positive | 3932065 - 3933897 | 65618.6 |
| alkane 1-monooxygenase | EJI01_19010 | Not Available | Negative | 3933919 - 3935061 | 42278.1 |
| 3-oxoacyl-acp synthase | EJI01_19015 | Not Available | Negative | 3935184 - 3937097 | 69835.7 |
| fatty acid desaturase | EJI01_19020 | Not Available | Negative | 3937101 - 3938012 | 35614.4 |
| sdr family oxidoreductase | EJI01_19025 | Not Available | Positive | 3938271 - 3939041 | 26922.2 |
| m48 family peptidase | EJI01_19030 | Not Available | Negative | 3939143 - 3940033 | 33024.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EJI01_19035 | Not Available | Negative | 3940043 - 3940798 | 28281.3 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EJI01_19040 | Not Available | Negative | 3940798 - 3941394 | 21271.7 |
| glycine--trna ligase subunit beta | EJI01_19045 | Not Available | Negative | 3941391 - 3943541 | 76742.6 |
| glycine--trna ligase subunit alpha | EJI01_19050 | Not Available | Negative | 3943545 - 3944450 | 34379.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
