Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | EJI01_18955 | Not Available | Negative | 3921705 - 3922835 | 40215.9 |
| hypothetical protein | EJI01_18960 | Not Available | Negative | 3922972 - 3923487 | 18863.3 |
| acetyl-coa c-acyltransferase | EJI01_18965 | Not Available | Negative | 3923601 - 3924785 | 40864.7 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EJI01_18970 | Not Available | Negative | 3924949 - 3926760 | 70375.1 |
| carbonate dehydratase | EJI01_18975 | Not Available | Negative | 3926764 - 3927468 | 26088.1 |
| merr family dna-binding transcriptional regulator | EJI01_18980 | Not Available | Negative | 3927521 - 3927916 | 14753.8 |
| mbl fold metallo-hydrolase | EJI01_18985 | Not Available | Positive | 3928015 - 3929076 | 39300.3 |
| protein kinase | EJI01_18990 | Not Available | Positive | 3929120 - 3930448 | 46966.5 |
| pseudouridine synthase | EJI01_18995 | Not Available | Positive | 3930462 - 3931376 | 34690.2 |
| response regulator transcription factor | EJI01_19000 | Not Available | Positive | 3931401 - 3932072 | 24328.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
