Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxychromene-2-carboxylate isomerase | EJI01_18855 | Not Available | Negative | 3900760 - 3901401 | 23501.1 |
| duf1289 domain-containing protein | EJI01_18860 | Not Available | Negative | 3901398 - 3901550 | 5600.6 |
| ybak/ebsc family protein | EJI01_18865 | Not Available | Negative | 3901586 - 3902074 | 17276.7 |
| hydroxymethylglutaryl-coa lyase | EJI01_18870 | Not Available | Negative | 3902056 - 3902997 | 33793.5 |
| glyoxylate/hydroxypyruvate reductase a | EJI01_18875 | Not Available | Negative | 3903018 - 3903947 | 33891.7 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | EJI01_18880 | Not Available | Negative | 3904086 - 3906101 | 72378.4 |
| duf4126 domain-containing protein | EJI01_18885 | Not Available | Negative | 3906330 - 3907001 | 23488.1 |
| enoyl-coa hydratase/isomerase family protein | EJI01_18890 | Not Available | Negative | 3906998 - 3907795 | 28407.1 |
| damage-inducible protein dinb | EJI01_18895 | Not Available | Negative | 3907792 - 3908301 | 19128.7 |
| methylcrotonoyl-coa carboxylase | EJI01_18900 | Not Available | Negative | 3908315 - 3909928 | 57380.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
