Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate transaminase | EJI01_01835 | Not Available | Positive | 393360 - 394565 | 43446.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EJI01_01840 | Not Available | Positive | 394586 - 395410 | 29270.0 |
| pilt/pilu family type 4a pilus atpase | EJI01_01845 | Not Available | Positive | 395536 - 396684 | 41940.7 |
| succinyl-diaminopimelate desuccinylase | EJI01_01850 | Not Available | Positive | 396701 - 397882 | 41905.0 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | EJI01_01855 | Not Available | Positive | 397965 - 398828 | 30800.7 |
| atp-binding cassette domain-containing protein | EJI01_01860 | Not Available | Positive | 398914 - 400875 | 71774.7 |
| hypothetical protein | EJI01_01865 | Not Available | Positive | 400901 - 401467 | 19993.7 |
| hypothetical protein | EJI01_01870 | Not Available | Positive | 401625 - 401849 | 8286.59 |
| hypothetical protein | EJI01_01875 | Not Available | Positive | 402219 - 402752 | 18411.5 |
| hypothetical protein | EJI01_01880 | Not Available | Positive | 402806 - 403147 | 11267.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
