Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | EJI01_18795 | Not Available | Negative | 3882199 - 3882876 | 23898.7 |
| methylenetetrahydrofolate reductase | EJI01_18800 | Not Available | Negative | 3882873 - 3883706 | 30135.0 |
| tlya family rna methyltransferase | EJI01_18805 | Not Available | Negative | 3883684 - 3884562 | 30635.7 |
| adenosylhomocysteinase | EJI01_18810 | Not Available | Negative | 3884572 - 3886011 | 52122.4 |
| peptide chain release factor 3 | EJI01_18815 | Not Available | Positive | 3886238 - 3887866 | 60271.4 |
| had-iib family hydrolase | EJI01_18820 | Not Available | Positive | 3887866 - 3888654 | 28591.1 |
| thioredoxin trxc | EJI01_18825 | Not Available | Negative | 3888673 - 3889110 | 15589.6 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_18830 | Not Available | Negative | 3889118 - 3890074 | 34138.4 |
| amino acid abc transporter substrate-binding protein | EJI01_18845 | Not Available | Positive | 3897446 - 3898558 | 38329.4 |
| mfs transporter | EJI01_18850 | Not Available | Negative | 3898917 - 3900611 | 60914.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
