Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_18745 | Not Available | Positive | 3873434 - 3873898 | 16014.5 |
| hypothetical protein | EJI01_18750 | Not Available | Positive | 3873895 - 3874212 | 10868.0 |
| tyrosine--trna ligase | EJI01_18755 | Not Available | Negative | 3874227 - 3875459 | 44885.8 |
| m23 family metallopeptidase | EJI01_18760 | Not Available | Positive | 3875617 - 3876966 | 48031.2 |
| anhydro-n-acetylmuramic acid kinase | EJI01_18765 | Not Available | Positive | 3877072 - 3878187 | 38266.7 |
| iron-sulfur cluster insertion protein erpa | EJI01_18770 | Not Available | Negative | 3878253 - 3878618 | 12919.1 |
| 30s ribosomal protein s9 | EJI01_18775 | Not Available | Negative | 3878737 - 3879129 | 14367.3 |
| 50s ribosomal protein l13 | EJI01_18780 | Not Available | Negative | 3879142 - 3879573 | 15717.2 |
| hypothetical protein | EJI01_18785 | Not Available | Negative | 3879728 - 3881161 | 50467.4 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | EJI01_18790 | Not Available | Positive | 3881280 - 3882179 | 32603.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
