Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | EJI01_18645 | Not Available | Positive | 3857291 - 3858823 | 54617.5 |
| Trna-met | Not Available | Not Available | Positive | 3858855 - 3858931 | Not Available |
| duf3606 domain-containing protein | EJI01_18655 | Not Available | Positive | 3859049 - 3859231 | 6849.06 |
| hypothetical protein | EJI01_18660 | Not Available | Negative | 3859240 - 3859449 | 7102.38 |
| hypothetical protein | EJI01_18665 | Not Available | Positive | 3859602 - 3859793 | 6914.16 |
| galactosyldiacylglycerol synthase | EJI01_18670 | Not Available | Negative | 3859787 - 3860998 | 44511.8 |
| udp-2,3-diacylglucosamine diphosphatase | EJI01_18675 | Not Available | Negative | 3860995 - 3861873 | 33590.9 |
| cation transporter | EJI01_18680 | Not Available | Negative | 3861962 - 3862915 | 34510.3 |
| holliday junction branch migration dna helicase ruvb | EJI01_18685 | Not Available | Negative | 3862930 - 3863985 | 38552.6 |
| cdp-alcohol phosphatidyltransferase family protein | EJI01_18690 | Not Available | Positive | 3864101 - 3864718 | 22009.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
