Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | EJI01_18545 | Not Available | Negative | 3839722 - 3840255 | 18899.3 |
| response regulator | EJI01_18550 | Not Available | Negative | 3840275 - 3840640 | 13654.7 |
| response regulator | EJI01_18555 | Not Available | Negative | 3840640 - 3841038 | 14670.7 |
| rubredoxin | EJI01_18560 | Not Available | Negative | 3841119 - 3841289 | 6282.5 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | EJI01_18565 | Not Available | Positive | 3841399 - 3842358 | 34400.0 |
| glutamate-1-semialdehyde-2,1-aminomutase | EJI01_18570 | Not Available | Positive | 3842358 - 3843653 | 45732.2 |
| hypothetical protein | EJI01_18575 | Not Available | Positive | 3843650 - 3844111 | 17032.2 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | EJI01_18580 | Not Available | Negative | 3844261 - 3845832 | 55993.0 |
| fis family transcriptional regulator | EJI01_18585 | Not Available | Negative | 3845839 - 3846075 | 9101.16 |
| trna dihydrouridine synthase dusb | EJI01_18590 | Not Available | Negative | 3846105 - 3847160 | 38380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
