Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_18445 | Not Available | Negative | 3811148 - 3811753 | 22264.9 |
| single-stranded-dna-specific exonuclease recj | EJI01_18450 | Not Available | Negative | 3811785 - 3813494 | 60813.6 |
| hypothetical protein | EJI01_18455 | Not Available | Negative | 3813494 - 3814456 | 34015.2 |
| lipoprotein-releasing abc transporter permease subunit | EJI01_18460 | Not Available | Positive | 3814576 - 3815832 | 45428.0 |
| lipoprotein-releasing abc transporter atp-binding protein lold | EJI01_18465 | Not Available | Positive | 3815825 - 3816580 | 26699.1 |
| atp-dependent clp protease proteolytic subunit | EJI01_18470 | Not Available | Positive | 3816650 - 3817237 | 21351.4 |
| outer membrane protein assembly factor | EJI01_18475 | Not Available | Positive | 3817296 - 3819185 | 69012.5 |
| translocation/assembly module tamb | EJI01_18480 | Not Available | Positive | 3819187 - 3823233 | 141930.0 |
| Trna-arg | Not Available | Not Available | Positive | 3823258 - 3823329 | Not Available |
| hypothetical protein | EJI01_18490 | Not Available | Negative | 3823339 - 3823611 | 10100.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
