Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication/partition related protein | EJI01_18340 | Not Available | Negative | 3789933 - 3790712 | 28414.0 |
| n-acetyltransferase | EJI01_18345 | Not Available | Negative | 3790746 - 3791585 | 29696.7 |
| duf1446 domain-containing protein | EJI01_18350 | Not Available | Negative | 3791586 - 3793373 | 62935.0 |
| acyl-coa dehydrogenase | EJI01_18355 | Not Available | Positive | 3793479 - 3794654 | 42637.4 |
| acyl-coa carboxylase subunit beta | EJI01_18360 | Not Available | Positive | 3794673 - 3796292 | 58195.1 |
| acetyl-coa carboxylase biotin carboxylase subunit | EJI01_18365 | Not Available | Positive | 3796302 - 3798266 | 69661.6 |
| amino acid racemase | EJI01_18370 | Not Available | Negative | 3798263 - 3798955 | 25040.4 |
| voc family protein | EJI01_18375 | Not Available | Negative | 3798958 - 3799341 | 14205.1 |
| hypothetical protein | EJI01_18380 | Not Available | Negative | 3799411 - 3799680 | 9750.19 |
| urease accessory protein ureg | EJI01_18385 | Not Available | Negative | 3799826 - 3800476 | 23484.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
