Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | EJI01_01785 | Not Available | Positive | 379763 - 380860 | 40821.8 |
| lps export abc transporter permease lptg | EJI01_01790 | Not Available | Positive | 380857 - 381966 | 41350.7 |
| cobalamin biosynthesis protein cbix | EJI01_01795 | Not Available | Positive | 381972 - 382340 | 13055.9 |
| cysb family hth-type transcriptional regulator | EJI01_01800 | Not Available | Positive | 382405 - 383346 | 34996.3 |
| pyridoxal phosphate-dependent aminotransferase | EJI01_01805 | Not Available | Positive | 383426 - 384592 | 42068.5 |
| duf3309 domain-containing protein | EJI01_01810 | Not Available | Positive | 384700 - 384858 | 5525.34 |
| atp-dependent rna helicase hrpa | EJI01_01815 | Not Available | Negative | 384933 - 388880 | 146977.0 |
| amino-acid n-acetyltransferase | EJI01_01820 | Not Available | Positive | 388924 - 390270 | 49222.3 |
| m81 family peptidase | EJI01_01825 | Not Available | Negative | 390257 - 391750 | 52362.9 |
| m81 family peptidase | EJI01_01830 | Not Available | Negative | 391761 - 393269 | 52973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
