Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase family 1 protein | EJI01_18280 | Not Available | Positive | 3762369 - 3763976 | 56049.0 |
| abc transporter permease | EJI01_18285 | Not Available | Positive | 3764023 - 3765201 | 41858.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | EJI01_18290 | Not Available | Positive | 3765515 - 3768745 | 106233.0 |
| hypothetical protein | EJI01_18295 | Not Available | Positive | 3768763 - 3769293 | 19481.7 |
| duf4198 domain-containing protein | EJI01_18305 | Not Available | Negative | 3769795 - 3770541 | 26274.7 |
| tonb-dependent siderophore receptor | EJI01_18310 | Not Available | Negative | 3770589 - 3772697 | 76671.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | EJI01_18315 | Not Available | Positive | 3773387 - 3784453 | 356957.0 |
| tannase/feruloyl esterase family alpha/beta hydrolase | EJI01_18325 | Not Available | Negative | 3785827 - 3787575 | 60018.3 |
| hypothetical protein | EJI01_18330 | Not Available | Positive | 3787859 - 3788053 | 7001.42 |
| pectate lyase | EJI01_18335 | Not Available | Positive | 3788050 - 3789879 | 67072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
