Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multicopper oxidase family protein | EJI01_18230 | Not Available | Negative | 3750091 - 3751497 | 52881.3 |
| hypothetical protein | EJI01_18235 | Not Available | Negative | 3752313 - 3752846 | 20195.3 |
| lysr family transcriptional regulator | EJI01_18240 | Not Available | Positive | 3753173 - 3754144 | 35398.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EJI01_18245 | Not Available | Positive | 3754302 - 3755000 | 25035.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EJI01_18250 | Not Available | Positive | 3755009 - 3755587 | 20094.4 |
| type iv pilus modification protein pilv | EJI01_18255 | Not Available | Positive | 3755587 - 3756009 | 14554.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EJI01_18260 | Not Available | Positive | 3756006 - 3757130 | 38903.7 |
| hypothetical protein | EJI01_18265 | Not Available | Positive | 3757127 - 3757729 | 20813.2 |
| pilus assembly protein | EJI01_18270 | Not Available | Positive | 3757747 - 3761508 | 133202.0 |
| hypothetical protein | EJI01_18275 | Not Available | Positive | 3761558 - 3762241 | 25094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
