Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | EJI01_18180 | Not Available | Negative | 3743991 - 3744479 | 17677.7 |
| dsbc family protein | EJI01_18185 | Not Available | Negative | 3744515 - 3744919 | 14546.3 |
| glycosyl hydrolase | EJI01_18190 | Not Available | Negative | 3745040 - 3745954 | 32778.9 |
| sco family protein | EJI01_18195 | Not Available | Negative | 3745852 - 3746601 | 27031.2 |
| tlpa family protein disulfide reductase | EJI01_18200 | Not Available | Negative | 3746605 - 3747051 | 16133.4 |
| c-type cytochrome | EJI01_18205 | Not Available | Negative | 3747180 - 3747857 | 24220.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | EJI01_18210 | Not Available | Negative | 3747873 - 3748469 | 21060.2 |
| duf2933 domain-containing protein | EJI01_18215 | Not Available | Negative | 3748515 - 3748769 | 8833.04 |
| p-ii family nitrogen regulator | EJI01_18220 | Not Available | Negative | 3748830 - 3749171 | 12461.3 |
| hypothetical protein | EJI01_18225 | Not Available | Negative | 3749320 - 3749766 | 15308.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
