Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_17970 | Not Available | Negative | 3705568 - 3706020 | 15979.8 |
| aminoacyl-trna hydrolase | EJI01_17975 | Not Available | Negative | 3706052 - 3706684 | 22911.8 |
| 50s ribosomal protein l25/general stress protein ctc | EJI01_17980 | Not Available | Negative | 3706764 - 3707423 | 23771.7 |
| ribose-phosphate pyrophosphokinase | EJI01_17985 | Not Available | Negative | 3707519 - 3708493 | 35253.6 |
| Trna-gln | Not Available | Not Available | Positive | 3708573 - 3708649 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EJI01_17995 | Not Available | Negative | 3708718 - 3709578 | 30518.9 |
| hypothetical protein | EJI01_18000 | Not Available | Negative | 3709575 - 3710066 | 17200.6 |
| tetratricopeptide repeat protein | EJI01_18005 | Not Available | Negative | 3710063 - 3711886 | 66350.5 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EJI01_18010 | Not Available | Positive | 3711968 - 3712783 | 29722.3 |
| dynamin family protein | EJI01_18015 | Not Available | Positive | 3712854 - 3714815 | 73087.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
