Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EJI01_17920 | Not Available | Negative | 3695697 - 3697055 | 49200.3 |
| 4-oxalocrotonate tautomerase family protein | EJI01_17925 | Not Available | Negative | 3697139 - 3697537 | 14447.3 |
| lysr family transcriptional regulator | EJI01_17930 | Not Available | Positive | 3697645 - 3698511 | 30830.5 |
| amidase | EJI01_17935 | Not Available | Negative | 3698536 - 3699942 | 50008.8 |
| abc transporter substrate-binding protein | EJI01_17940 | Not Available | Negative | 3699998 - 3701488 | 53483.1 |
| atp-binding cassette domain-containing protein | EJI01_17945 | Not Available | Negative | 3701540 - 3702343 | 29054.2 |
| abc transporter atp-binding protein | EJI01_17950 | Not Available | Negative | 3702340 - 3703326 | 35015.8 |
| abc transporter permease | EJI01_17955 | Not Available | Negative | 3703335 - 3704216 | 31045.8 |
| abc transporter permease | EJI01_17960 | Not Available | Negative | 3704213 - 3705163 | 34107.9 |
| yfhl family 4fe-4s dicluster ferredoxin | EJI01_17965 | Not Available | Positive | 3705311 - 3705571 | 9715.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
