Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | EJI01_17870 | Not Available | Positive | 3686409 - 3687056 | 22695.5 |
| pantetheine-phosphate adenylyltransferase | EJI01_17875 | Not Available | Positive | 3687101 - 3687604 | 18531.4 |
| 5-oxoprolinase subunit pxpb | EJI01_17880 | Not Available | Positive | 3687607 - 3688254 | 23085.8 |
| biotin-dependent carboxyltransferase family protein | EJI01_17885 | Not Available | Positive | 3688254 - 3689273 | 35977.4 |
| 5-oxoprolinase subunit pxpa | EJI01_17890 | Not Available | Positive | 3689284 - 3690024 | 25973.0 |
| pyroglutamyl-peptidase i | EJI01_17895 | Not Available | Positive | 3690040 - 3690687 | 22728.5 |
| alpha/beta hydrolase | EJI01_17900 | Not Available | Negative | 3690684 - 3691415 | 26573.3 |
| histidine phosphatase family protein | EJI01_17905 | Not Available | Positive | 3691479 - 3692150 | 25143.9 |
| penicillin-binding protein | EJI01_17910 | Not Available | Negative | 3692145 - 3695150 | 111070.0 |
| hypothetical protein | EJI01_17915 | Not Available | Positive | 3695304 - 3695669 | 13221.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
