Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surf1 family protein | EJI01_17820 | Not Available | Positive | 3676601 - 3677323 | 26588.8 |
| hypothetical protein | EJI01_17825 | Not Available | Positive | 3677265 - 3677990 | 26453.0 |
| heme a synthase | EJI01_17830 | Not Available | Positive | 3677997 - 3679187 | 43182.4 |
| protoheme ix farnesyltransferase | EJI01_17835 | Not Available | Positive | 3679184 - 3680089 | 32781.9 |
| sco family protein | EJI01_17840 | Not Available | Positive | 3680098 - 3680703 | 21780.3 |
| rna polymerase sigma factor rpoh | EJI01_17845 | Not Available | Negative | 3680776 - 3681717 | 34612.3 |
| duf962 domain-containing protein | EJI01_17850 | Not Available | Negative | 3681886 - 3682347 | 17075.3 |
| signal recognition particle-docking protein ftsy | EJI01_17855 | Not Available | Negative | 3682409 - 3683536 | 39337.5 |
| insulinase family protein | EJI01_17860 | Not Available | Positive | 3683566 - 3685005 | 52288.6 |
| insulinase family protein | EJI01_17865 | Not Available | Positive | 3685019 - 3686374 | 47893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
