Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase | EJI01_01735 | Not Available | Negative | 371103 - 373400 | 86078.7 |
| nfed family protein | EJI01_01740 | Not Available | Positive | 373511 - 373936 | 14733.9 |
| paraslipin | EJI01_01745 | Not Available | Positive | 373969 - 374898 | 33581.6 |
| Trna-ser | Not Available | Not Available | Positive | 374955 - 375045 | Not Available |
| hypothetical protein | EJI01_01755 | Not Available | Positive | 375186 - 375482 | 10598.2 |
| response regulator | EJI01_01760 | Not Available | Positive | 375626 - 376006 | 13981.7 |
| branched-chain amino acid abc transporter substrate-binding protein | EJI01_01765 | Not Available | Negative | 376051 - 377265 | 41776.1 |
| hypothetical protein | EJI01_01770 | Not Available | Negative | 377389 - 377802 | 14647.4 |
| dna polymerase iii subunit chi | EJI01_01775 | Not Available | Negative | 377802 - 378239 | 16024.0 |
| leucyl aminopeptidase | EJI01_01780 | Not Available | Negative | 378236 - 379741 | 51876.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
