Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytidine(34)-2'-o)-methyltransferase | EJI01_17770 | Not Available | Negative | 3668567 - 3669028 | 17350.8 |
| comf family protein | EJI01_17775 | Not Available | Negative | 3669118 - 3669837 | 25851.6 |
| biotin synthase | EJI01_17780 | Not Available | Positive | 3669860 - 3670774 | 34141.1 |
| duf2244 domain-containing protein | EJI01_17785 | Not Available | Positive | 3670898 - 3671374 | 17538.3 |
| cytochrome c oxidase subunit ii | EJI01_17790 | Not Available | Positive | 3671438 - 3672616 | 42751.4 |
| cytochrome c oxidase subunit i | EJI01_17795 | Not Available | Positive | 3672674 - 3674305 | 60310.6 |
| cytochrome c oxidase assembly protein | EJI01_17800 | Not Available | Positive | 3674431 - 3675057 | 22765.4 |
| duf2970 domain-containing protein | EJI01_17805 | Not Available | Positive | 3675054 - 3675263 | 7500.37 |
| cytochrome c oxidase subunit 3 | EJI01_17810 | Not Available | Positive | 3675318 - 3676199 | 33196.3 |
| twin transmembrane helix small protein | EJI01_17815 | Not Available | Negative | 3676271 - 3676501 | 8101.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
