Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flga | EJI01_17510 | Not Available | Negative | 3621464 - 3621745 | 10265.5 |
| gntr family transcriptional regulator | EJI01_17515 | Not Available | Positive | 3621868 - 3622638 | 28445.5 |
| lysr family transcriptional regulator | EJI01_17520 | Not Available | Negative | 3622635 - 3623558 | 33451.2 |
| formate dehydrogenase | EJI01_17525 | Not Available | Positive | 3623659 - 3626574 | 107936.0 |
| 4fe-4s dicluster domain-containing protein | EJI01_17530 | Not Available | Positive | 3626571 - 3627392 | 29370.0 |
| dmso reductase | EJI01_17535 | Not Available | Positive | 3627389 - 3628312 | 32738.9 |
| nadh oxidase | EJI01_17540 | Not Available | Positive | 3628391 - 3629533 | 40153.8 |
| flagellar protein flgn | EJI01_17545 | Not Available | Negative | 3629549 - 3629995 | 15590.5 |
| flagellar biosynthesis anti-sigma factor flgm | EJI01_17550 | Not Available | Negative | 3630004 - 3630300 | 10162.1 |
| flagellar basal body p-ring formation protein flga | EJI01_17555 | Not Available | Negative | 3630360 - 3631049 | 23708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
