Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobq/cobb/mind/para nucleotide binding domain-containing protein | EJI01_17460 | Not Available | Positive | 3610020 - 3611171 | 41190.1 |
| cpaf family protein | EJI01_17465 | Not Available | Positive | 3611208 - 3612581 | 50949.5 |
| type ii secretion system f family protein | EJI01_17470 | Not Available | Positive | 3612593 - 3613585 | 36359.6 |
| type ii secretion system f family protein | EJI01_17475 | Not Available | Positive | 3613598 - 3614506 | 33034.3 |
| response regulator transcription factor | EJI01_17480 | Not Available | Negative | 3614526 - 3615182 | 24261.4 |
| histidine kinase | EJI01_17485 | Not Available | Negative | 3615223 - 3616905 | 61785.6 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_17490 | Not Available | Negative | 3617280 - 3618260 | 34409.6 |
| ldh family oxidoreductase | EJI01_17495 | Not Available | Negative | 3618291 - 3619298 | 34835.0 |
| hydroxyacid dehydrogenase | EJI01_17500 | Not Available | Negative | 3619298 - 3620224 | 31839.4 |
| d-galactarate dehydratase | EJI01_17505 | Not Available | Negative | 3620241 - 3621416 | 42234.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
