Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_17410 | Not Available | Positive | 3603145 - 3603360 | 7997.77 |
| prepilin peptidase | EJI01_17415 | Not Available | Positive | 3603837 - 3604421 | 20537.9 |
| flp pilus assembly protein cpab | EJI01_17420 | Not Available | Positive | 3604460 - 3605311 | 29529.1 |
| type ii and iii secretion system protein family protein | EJI01_17425 | Not Available | Positive | 3605263 - 3606834 | 54861.9 |
| hypothetical protein | EJI01_17430 | Not Available | Positive | 3606856 - 3607125 | 9238.28 |
| flp family type ivb pilin | EJI01_17435 | Not Available | Positive | 3607245 - 3607454 | 7251.86 |
| flp family type ivb pilin | EJI01_17440 | Not Available | Positive | 3607607 - 3607783 | 6101.65 |
| hypothetical protein | EJI01_17445 | Not Available | Positive | 3607801 - 3609114 | 45269.3 |
| pilus assembly protein | EJI01_17450 | Not Available | Positive | 3609124 - 3609573 | 15868.4 |
| pilus assembly protein | EJI01_17455 | Not Available | Positive | 3609570 - 3610004 | 15706.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
