Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EJI01_17305 | Not Available | Positive | 3582302 - 3583384 | 39318.2 |
| trap transporter large permease subunit | EJI01_17310 | Not Available | Negative | 3583441 - 3585231 | 63709.3 |
| trap transporter small permease subunit | EJI01_17315 | Not Available | Negative | 3585244 - 3585849 | 22773.0 |
| hypothetical protein | EJI01_17320 | Not Available | Positive | 3586037 - 3587317 | 47558.0 |
| tetr family transcriptional regulator | EJI01_17325 | Not Available | Positive | 3587366 - 3588022 | 24428.4 |
| dctp deaminase | EJI01_17330 | Not Available | Positive | 3588030 - 3588596 | 21335.3 |
| metalloprotease | EJI01_17335 | Not Available | Positive | 3588712 - 3589590 | 31261.8 |
| dead/deah box helicase | EJI01_17340 | Not Available | Positive | 3589680 - 3591152 | 54003.6 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | EJI01_17345 | Not Available | Negative | 3591165 - 3592007 | 30095.2 |
| hlyc/corc family transporter | EJI01_17350 | Not Available | Positive | 3592030 - 3593343 | 47271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
