Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | EJI01_01685 | Not Available | Negative | 356970 - 359885 | 103903.0 |
| transcription termination/antitermination protein nusa | EJI01_01690 | Not Available | Negative | 359910 - 361394 | 55067.6 |
| ribosome maturation factor rimp | EJI01_01695 | Not Available | Negative | 361412 - 362038 | 22527.8 |
| ybfb/yjij family mfs transporter | EJI01_01700 | Not Available | Negative | 362199 - 363404 | 41565.3 |
| abc transporter atp-binding protein | EJI01_01705 | Not Available | Negative | 363425 - 365128 | 60260.0 |
| abc transporter permease | EJI01_01710 | Not Available | Negative | 365125 - 366171 | 38645.4 |
| microcin c abc transporter permease yejb | EJI01_01715 | Not Available | Negative | 366423 - 367457 | 38319.6 |
| abc transporter substrate-binding protein | EJI01_01720 | Not Available | Negative | 367466 - 369262 | 66912.7 |
| enoyl-[acyl-carrier-protein] reductase fabi | EJI01_01725 | Not Available | Positive | 369300 - 370094 | 27993.6 |
| dna ligase | EJI01_01730 | Not Available | Positive | 370178 - 371095 | 33589.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
