Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3299 domain-containing protein | EJI01_17255 | Not Available | Negative | 3572827 - 3573432 | 21570.1 |
| abc transporter permease | EJI01_17260 | Not Available | Negative | 3573435 - 3574697 | 45142.5 |
| abc transporter atp-binding protein | EJI01_17265 | Not Available | Negative | 3574694 - 3575401 | 25346.6 |
| duf2796 domain-containing protein | EJI01_17270 | Not Available | Negative | 3575398 - 3575952 | 19428.4 |
| sulfurtransferase | EJI01_17275 | Not Available | Negative | 3575949 - 3576860 | 31793.7 |
| dmt family transporter | EJI01_17280 | Not Available | Negative | 3576871 - 3577788 | 32207.0 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EJI01_17285 | Not Available | Negative | 3577813 - 3578952 | 43452.3 |
| exodeoxyribonuclease vii small subunit | EJI01_17290 | Not Available | Positive | 3579132 - 3579398 | 9325.19 |
| polyprenyl synthetase family protein | EJI01_17295 | Not Available | Positive | 3579395 - 3580312 | 31651.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EJI01_17300 | Not Available | Positive | 3580328 - 3582211 | 67278.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
