Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJI01_17205 | Not Available | Positive | 3564774 - 3565676 | 32192.3 |
| fad-dependent oxidoreductase | EJI01_17210 | Not Available | Negative | 3565941 - 3567149 | 42624.6 |
| transporter substrate-binding domain-containing protein | EJI01_17215 | Not Available | Positive | 3567372 - 3568256 | 31761.6 |
| aspartate/glutamate racemase family protein | EJI01_17220 | Not Available | Positive | 3568276 - 3569043 | 26968.9 |
| carboxymethylenebutenolidase | EJI01_17225 | Not Available | Positive | 3569114 - 3570022 | 31637.7 |
| zip family metal transporter | EJI01_17230 | Not Available | Positive | 3570085 - 3570972 | 31607.4 |
| hypothetical protein | EJI01_17235 | Not Available | Positive | 3571102 - 3571338 | 8388.85 |
| duf421 domain-containing protein | EJI01_17240 | Not Available | Positive | 3571355 - 3571891 | 20134.6 |
| dodecin domain-containing protein | EJI01_17245 | Not Available | Negative | 3571905 - 3572114 | 7702.01 |
| hemerythrin domain-containing protein | EJI01_17250 | Not Available | Negative | 3572181 - 3572663 | 18000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
