Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | EJI01_17155 | Not Available | Positive | 3552844 - 3553551 | 24389.3 |
| Trna-ala | Not Available | Not Available | Positive | 3553592 - 3553667 | Not Available |
| alpha/beta hydrolase | EJI01_17165 | Not Available | Positive | 3553726 - 3554592 | 31309.4 |
| gmp reductase | EJI01_17170 | Not Available | Negative | 3554593 - 3555570 | 35458.9 |
| dna helicase ii | EJI01_17175 | Not Available | Positive | 3555743 - 3558115 | 88118.5 |
| hypothetical protein | EJI01_17180 | Not Available | Negative | 3558297 - 3559100 | 28398.4 |
| homoserine kinase | EJI01_17185 | Not Available | Negative | 3559128 - 3560186 | 38357.0 |
| hypothetical protein | EJI01_17190 | Not Available | Negative | 3560196 - 3560555 | 12366.5 |
| dna polymerase i | EJI01_17195 | Not Available | Positive | 3560652 - 3563444 | 102227.0 |
| m20/m25/m40 family metallo-hydrolase | EJI01_17200 | Not Available | Positive | 3563470 - 3564762 | 45992.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
