Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | EJI01_17100 | Not Available | Negative | 3541884 - 3543008 | 40837.6 |
| ribosome small subunit-dependent gtpase a | EJI01_17105 | Not Available | Negative | 3543005 - 3543946 | 34044.7 |
| 4a-hydroxytetrahydrobiopterin dehydratase | EJI01_17110 | Not Available | Negative | 3543965 - 3544306 | 12327.5 |
| m48 family peptidase | EJI01_17115 | Not Available | Negative | 3544324 - 3545583 | 46050.1 |
| oligoribonuclease | EJI01_17120 | Not Available | Positive | 3545648 - 3546244 | 22148.4 |
| dead/deah box helicase | EJI01_17125 | Not Available | Positive | 3546456 - 3548291 | 65676.9 |
| nad-dependent succinate-semialdehyde dehydrogenase | EJI01_17135 | Not Available | Positive | 3548764 - 3550209 | 50426.6 |
| aldo/keto reductase | EJI01_17140 | Not Available | Negative | 3550216 - 3551265 | 37860.5 |
| Trna-lys | Not Available | Not Available | Positive | 3551423 - 3551498 | Not Available |
| acetyl-coa c-acyltransferase | EJI01_17150 | Not Available | Negative | 3551563 - 3552744 | 41267.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
