Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter | EJI01_17050 | Not Available | Positive | 3534549 - 3535559 | 35046.4 |
| hypothetical protein | EJI01_17055 | Not Available | Negative | 3535632 - 3536078 | 16250.0 |
| n-acetyltransferase family protein | EJI01_17060 | Not Available | Negative | 3536075 - 3536596 | 18589.0 |
| 30s ribosomal protein s16 | EJI01_17065 | Not Available | Positive | 3536762 - 3537025 | 9652.7 |
| ribosome maturation factor rimm | EJI01_17070 | Not Available | Positive | 3537041 - 3537595 | 20100.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EJI01_17075 | Not Available | Positive | 3537618 - 3538364 | 27302.7 |
| 50s ribosomal protein l19 | EJI01_17080 | Not Available | Positive | 3538464 - 3538844 | 14021.0 |
| coa pyrophosphatase | EJI01_17085 | Not Available | Positive | 3539011 - 3539727 | 26237.5 |
| cobd/cbib family protein | EJI01_17090 | Not Available | Positive | 3539780 - 3540781 | 36215.7 |
| histidinol-phosphate transaminase | EJI01_17095 | Not Available | Positive | 3540798 - 3541877 | 38834.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
