Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EJI01_17000 | Not Available | Positive | 3525838 - 3526689 | 31851.9 |
| voc family protein | EJI01_17005 | Not Available | Positive | 3526689 - 3527108 | 15678.6 |
| helix-turn-helix domain-containing protein | EJI01_17010 | Not Available | Negative | 3527099 - 3528076 | 35364.6 |
| isochorismatase family protein | EJI01_17015 | Not Available | Negative | 3528092 - 3528664 | 20487.3 |
| ai-2e family transporter | EJI01_17020 | Not Available | Negative | 3528771 - 3529769 | 35856.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | EJI01_17025 | Not Available | Negative | 3529844 - 3530884 | 35826.5 |
| dnaa regulatory inactivator hda | EJI01_17030 | Not Available | Positive | 3531058 - 3531744 | 25053.0 |
| polynucleotide adenylyltransferase pcnb | EJI01_17035 | Not Available | Positive | 3531772 - 3533343 | 57710.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EJI01_17040 | Not Available | Positive | 3533340 - 3533801 | 16448.8 |
| duf47 domain-containing protein | EJI01_17045 | Not Available | Positive | 3533891 - 3534535 | 24701.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
