Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | EJI01_16950 | Not Available | Positive | 3515740 - 3516921 | 41264.5 |
| smi1/knr4 family protein | EJI01_16955 | Not Available | Negative | 3516926 - 3518173 | 44328.0 |
| tryptophan 2,3-dioxygenase | EJI01_16960 | Not Available | Negative | 3518208 - 3519044 | 32124.6 |
| kynureninase | EJI01_16965 | Not Available | Negative | 3519057 - 3520340 | 45990.2 |
| arylformamidase | EJI01_16970 | Not Available | Negative | 3520334 - 3520978 | 23175.1 |
| ornithine carbamoyltransferase | EJI01_16975 | Not Available | Negative | 3521053 - 3521988 | 34866.5 |
| aspartate aminotransferase family protein | EJI01_16980 | Not Available | Negative | 3521985 - 3523190 | 42881.1 |
| duf3579 domain-containing protein | EJI01_16985 | Not Available | Positive | 3523352 - 3523669 | 11521.8 |
| 30s ribosomal protein s20 | EJI01_16990 | Not Available | Negative | 3523786 - 3524100 | 11197.7 |
| murein biosynthesis integral membrane protein murj | EJI01_16995 | Not Available | Positive | 3524217 - 3525782 | 55529.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
