Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | EJI01_16895 | Not Available | Positive | 3502270 - 3503046 | 28804.6 |
| coa ester lyase | EJI01_16900 | Not Available | Positive | 3503043 - 3504044 | 35253.1 |
| hypothetical protein | EJI01_16905 | Not Available | Positive | 3504073 - 3504645 | 20094.4 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EJI01_16910 | Not Available | Positive | 3504714 - 3507299 | 92599.4 |
| xre family transcriptional regulator | EJI01_16915 | Not Available | Negative | 3507338 - 3508171 | 30127.0 |
| hypothetical protein | EJI01_16920 | Not Available | Positive | 3508303 - 3508719 | 14106.7 |
| aconitate hydratase | EJI01_16925 | Not Available | Positive | 3508815 - 3511688 | 103728.0 |
| hypothetical protein | EJI01_16930 | Not Available | Negative | 3511769 - 3513172 | 52191.9 |
| ferrous iron transport protein a | EJI01_16935 | Not Available | Positive | 3513262 - 3513558 | 10547.8 |
| ferrous iron transporter b | EJI01_16940 | Not Available | Positive | 3513551 - 3515449 | 67720.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
